|
Human chromosomes are
composed of DNA (genes), which provide the basic information to
develop, maintain and reproduce an entire human being. All of this
information is contained in 46 chromosomes. The chromosome complement
includes 22 pairs of autosomes and either XX (female) or XY (male) sex
chromosomes. In a body every nucleated cell contains this complement,
therefore the analysis can be preformed on any dividing cell type
(lymphocytes fibroblasts, bone-marrow cells etc.) As mentioned above,
these cells provide considerable information
-
sex chromosome abnormality (
Klinefelter’s and Turner’s syndromes etc.)
Autosome related abnormality with changes in modal number,
translocations or rearrangements (Down’s syndrome, infertility, or
increased spontaneous abortions). Chromosome breakage following
exposure to radiation or chemicals with increased gaps, breaks and
the presence of fragments.
-
A second population of cells for
cytogenetic study is the leukemic cells. Leukemic blast cells are
found primarily in bone-marrow and under certain conditions in the
peripheral blood. After culturing these cells, the chromosome
pattern is studied for modal number, the presence of specific
translocations ( i.e. classical Ph’ chromosome t(9;22), and
unusual structural rearrangements. The presence of marker
chromosome is often valuable in identification of the malignant
population during therapy.
-
The third population of cells to
study are those derived from fetus in Utero. During gestation, the
fetus sheds cells into the amniotic fluid. At around 16 weeks, the
clinician can locate the fetus with sonography and remove 20-30
cc. of A.F for analysis. These cells are cultured which takes
around 15-25 days and ultimately chromosomes are studied for any
abnormality.
The laboratory uses
several methods for determination of fine structure and identification
of individual chromosomes. These include Giemsa-trypsin banding,
quinacrine fluorescence and centromere banding techniques. On each
specimen 20 well spread cells are analysed and photographed. In case
of mosaicism, more cells are examined. We are proud to say that most
recent introduced updating auto karyotyping system by us is playing
excellent and exclusive role in analyzing the chromosomes leading
much more sensitive & specific results.
Novel laboratory techniques
are often the driving force behind new ideas in science. Certainly the
use of cytogenetic studies for clinical testing literally exploded in
the ‘60s and ‘70s because of new discoveries. In the 1980s the
techniques of molecular biology were applied to cytogenetic
preparations. We call this “hybrid” technology molecular cytogenetics,
and it is transforming the way we study chromosomal changes in humans.
It has improved the detection of indeed in some cases defined,
microdeletion syndromes. The supernumerary markers can be identified
and we now have a real potential of predicting phenotype for marker
carriers, benign or adverse. With molecular cytogenetic techniques, we
can now detect some chromosomal abnormalities in nondividing cells
with interphase nuclei. Standard cytogenetics requires actively
dividing cells with metaphase nuclei. Some constitutional chromosomal
abnormalities and phenomena such as mosaicism and chimerism can be
addressed without growing cells in culture or in cell types that do
not adapt well to tissue culture. Potentially, chromosomal aneuploidy
studies (i.e. studies looking for abnormalities in chromosome number)
can be done more quickly. Preserved, rather than fresh, tissue can be
investigated for retrospective studies. We can ask questions of
chromosome organization, its relationship to gene expression and
tissue specificity in ways that were not possible a few years ago.
In recent years the possibilities for
visualizing several chromosomal targets simultaneously has meant that
Fluorescence In situ Hybridization (FISH) analysis has an increasing
role to play in the study of patient samples. The clinical
cytogenetics service laboratory no longer focuses on the morphological
analysis of chromosomal aberrations alone, but now has provided
comprehensive molecular cytogenetic analysis of diverse gene sequences
consistently involved in certain classes of cancer and a variety of
human genetic diseases.
|